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Jackson Laboratory thy1-gcamp6s gp4.3
Thy1 Gcamp6s Gp4.3, supplied by Jackson Laboratory, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Article Title: Area-specific encoding of temporal information in the neocortex.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Experimental models: Organisms/strains Mouse: Thy1-GCaMP6s GP4.3 The Jackson Laboratory (Dana et al., 2014)49 024275 Software and algorithms MATLAB Mathworks https://www.mathworks.com LabView National Instruments https://www.ni.com X-Series, PCIe 6351 National Instruments https://www.ni.com SciScan Scientifica https://www.scientifica.uk.com/products/ scientifica-sciscan CalmAn Pnevmatikakis et al., 201665 https://github.com/flatironinstitute/CaImAn NoRmCorre Pnevmatikakis and Giovannucci, 201766 https://github.com/flatironinstitute/NoRMCorre Time decoding Taxidis et al., 20209 Two photon signal analysis This paper https://doi.org/10.5281/zenodo.14714881 Other Custom two-photon microscopy Hennestad et al., 202167 https://doi.org/10.5281/zenodo.5680380 1-butanol Sigma 360465 Methyl-butyrate Sigma 246093 Mineral oil Sigma 330779 Solenoid valve The Lee Company LHDA123121H High-capacity ventilator Cloudline AI-CLT4 Activated carbon filter Cloudline 4-inch diameter Photoionization detector AuroraScientfic 200B, miniPID

Article Title: Representations of tactile object location in the retrosplenial cortex.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Experimental models: Organisms/strains Mouse: Thy1-GCaMP6s GP4.3 The Jackson Laboratory 024275 Software and algorithms MATLAB MathWorks https://mathworks.com LabView 2018 National Instruments https://www.ni.com SciScan Scientifica https://www.scientifica.uk.com/products/scientifica-sciscan CalmAn Giovannucci et al.47 https://github.com/flatironinstitute/CaImAn NoRmCorre Pnevmatikakis et al.90 https://github.com/flatironinstitute/NoRMCorre DeepLabCut Mathis et al.58 https://github.com/DeepLabCut Analysis of object location cells This paper https://doi.org/10.5281/zenodo.8316214 Other Rotary servo motor Zaber NM08AS-T4 Stepper motor controller Zaber X-MCB2 Custom two-photon microscopy Hennestad et al.89 https://doi.org/10.5281/ zenodo.5680380

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Article Title: Area-specific encoding of temporal information in the neocortex.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Experimental models: Organisms/strains Mouse: Thy1-GCaMP6s GP4.3 The Jackson Laboratory (Dana et al., 2014)49 024275 Software and algorithms MATLAB Mathworks https://www.mathworks.com LabView National Instruments https://www.ni.com X-Series, PCIe 6351 National Instruments https://www.ni.com SciScan Scientifica https://www.scientifica.uk.com/products/ scientifica-sciscan CalmAn Pnevmatikakis et al., 201665 https://github.com/flatironinstitute/CaImAn NoRmCorre Pnevmatikakis and Giovannucci, 201766 https://github.com/flatironinstitute/NoRMCorre Time decoding Taxidis et al., 20209 Two photon signal analysis This paper https://doi.org/10.5281/zenodo.14714881 Other Custom two-photon microscopy Hennestad et al., 202167 https://doi.org/10.5281/zenodo.5680380 1-butanol Sigma 360465 Methyl-butyrate Sigma 246093 Mineral oil Sigma 330779 Solenoid valve The Lee Company LHDA123121H High-capacity ventilator Cloudline AI-CLT4 Activated carbon filter Cloudline 4-inch diameter Photoionization detector AuroraScientfic 200B, miniPID

Article Title: Representations of tactile object location in the retrosplenial cortex.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Experimental models: Organisms/strains Mouse: Thy1-GCaMP6s GP4.3 The Jackson Laboratory 024275 Software and algorithms MATLAB MathWorks https://mathworks.com LabView 2018 National Instruments https://www.ni.com SciScan Scientifica https://www.scientifica.uk.com/products/scientifica-sciscan CalmAn Giovannucci et al.47 https://github.com/flatironinstitute/CaImAn NoRmCorre Pnevmatikakis et al.90 https://github.com/flatironinstitute/NoRMCorre DeepLabCut Mathis et al.58 https://github.com/DeepLabCut Analysis of object location cells This paper https://doi.org/10.5281/zenodo.8316214 Other Rotary servo motor Zaber NM08AS-T4 Stepper motor controller Zaber X-MCB2 Custom two-photon microscopy Hennestad et al.89 https://doi.org/10.5281/ zenodo.5680380



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a . Top left, representative video frame with automatically labeled tongue markers using DeepLabCut. Top middle, superimposed tongue tip trajectories and x and y velocities of individual lick events during lick left (red) and lick right (blue). Data from an example mouse across sessions within the same task context. Tongue tip trajectory scale bar, 4 pixels (x) and 6 pixels (y). X velocity scale bar, 12 ms and 2 pixels/s. Y velocity scale bar, 12 ms and 1.5 pixels/s. Top right, scatter of averaged pairwise similarity of single lick events (Pearson’s correlation) calculated within session versus across sessions. Data from two mice. Bottom, same as top but for data across task contexts 1 and 2. b . Same as a , but for jaw marker analysis. Jaw tip trajectory scale bar, 4 pixels (x) and 4 pixels (y). X velocity scale bar, 12 ms and 1 pixels/s. Y velocity scale bar, 12 ms and 1.5 pixels/s. c . Left, schematics of learning speed under two models. Context-specific saving effect (top): faster re-learning only for previously learned tasks. Context non-specific saving effect (bottom): faster learning each time. Right, faster reversal learning is consistent with a context-specific saving effect. Re-learning of task context 2’ is significantly faster than initial learning of task context 2 (top). P = 0.0487, paired t-test. Circles indicate individual mice (N = 13 mice). Crosses indicate mean ± s.e.m. We examine task context 2 because the initial learning of task context 1 is confounded by the exposure to home-cage training. To examine context non-specific saving effect, we compare the speed of re-learning task context 1’ versus re-learning task context 2’ (bottom). The two conditions have similar task-specific prior training. No significant difference is observed. P = 0.3425, two-tailed paired t-test. d . Same as Fig. , but separately plotting photoinhibition results for task context 1 (left) and task context 2 (right). e . Experimental timeline of an example mouse imaged within the same task context over extended time. Black, behavior training in automated home-cage. Gray, habituation in two-photon setup. Red, calcium imaging in two-photon setup. All the trials are concatenated. Black triangle indicates the end of learning voluntary head-fixation and start of learning in tactile instructed licking task. Averaging window, 100 trials. f . Same as e , but for two mice imaged across different task contexts. g . Summary plot of experimental timeline from all <t>GP4.3</t> mice used for imaging in this study. h-i . Behavior performance curves for the initial learning from GP4.3 mice ( h , n = 15 mice, all were trained in automated home-cage) and Slc17a7-Cre x Ai148 mice ( i , n = 11 mice, 7 mice were trained in automated home-cage and 4 mice were manually trained). Different colors represent individual mice. Circles indicate end of the learning curves for GP4.3 mice and termination of training for Slc17a7-Cre x Ai148 mice. j . Behavior performance within imaging sessions across 4 segments of trials. Thin gray lines indicate individual sessions. Thick black lines indicate mean ± s.e.m. Data from Fig. .
Gp4.3 Mice (Thy1 Gcamp6s, supplied by Jackson Laboratory, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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a . Top left, representative video frame with automatically labeled tongue markers using DeepLabCut. Top middle, superimposed tongue tip trajectories and x and y velocities of individual lick events during lick left (red) and lick right (blue). Data from an example mouse across sessions within the same task context. Tongue tip trajectory scale bar, 4 pixels (x) and 6 pixels (y). X velocity scale bar, 12 ms and 2 pixels/s. Y velocity scale bar, 12 ms and 1.5 pixels/s. Top right, scatter of averaged pairwise similarity of single lick events (Pearson’s correlation) calculated within session versus across sessions. Data from two mice. Bottom, same as top but for data across task contexts 1 and 2. b . Same as a , but for jaw marker analysis. Jaw tip trajectory scale bar, 4 pixels (x) and 4 pixels (y). X velocity scale bar, 12 ms and 1 pixels/s. Y velocity scale bar, 12 ms and 1.5 pixels/s. c . Left, schematics of learning speed under two models. Context-specific saving effect (top): faster re-learning only for previously learned tasks. Context non-specific saving effect (bottom): faster learning each time. Right, faster reversal learning is consistent with a context-specific saving effect. Re-learning of task context 2’ is significantly faster than initial learning of task context 2 (top). P = 0.0487, paired t-test. Circles indicate individual mice (N = 13 mice). Crosses indicate mean ± s.e.m. We examine task context 2 because the initial learning of task context 1 is confounded by the exposure to home-cage training. To examine context non-specific saving effect, we compare the speed of re-learning task context 1’ versus re-learning task context 2’ (bottom). The two conditions have similar task-specific prior training. No significant difference is observed. P = 0.3425, two-tailed paired t-test. d . Same as Fig. , but separately plotting photoinhibition results for task context 1 (left) and task context 2 (right). e . Experimental timeline of an example mouse imaged within the same task context over extended time. Black, behavior training in automated home-cage. Gray, habituation in two-photon setup. Red, calcium imaging in two-photon setup. All the trials are concatenated. Black triangle indicates the end of learning voluntary head-fixation and start of learning in tactile instructed licking task. Averaging window, 100 trials. f . Same as e , but for two mice imaged across different task contexts. g . Summary plot of experimental timeline from all <t>GP4.3</t> mice used for imaging in this study. h-i . Behavior performance curves for the initial learning from GP4.3 mice ( h , n = 15 mice, all were trained in automated home-cage) and Slc17a7-Cre x Ai148 mice ( i , n = 11 mice, 7 mice were trained in automated home-cage and 4 mice were manually trained). Different colors represent individual mice. Circles indicate end of the learning curves for GP4.3 mice and termination of training for Slc17a7-Cre x Ai148 mice. j . Behavior performance within imaging sessions across 4 segments of trials. Thin gray lines indicate individual sessions. Thick black lines indicate mean ± s.e.m. Data from Fig. .
Gp4.3 Mice (Thy1 Gcamp6s), supplied by Jackson Laboratory, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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vivo Ca 2+ imaging analysis of the effect of I KM modulators on cortical and hippocampal SD and epileptic activities. A&B Representative images and traces of tissue excitability test by ex vivo Ca 2+ imaging. Horizontal slices obtained from WT- or Scn8a D/+ <t>-GCAMP6s</t> slices were incubated in Mg 2+ free ACSF. A. Raw and ratio fluorescence images showing Ca 2+ activities in the cortex and hippocampus CA3. SD was detected as a prolonged Ca 2+ elevation whereas seizure- like activities were detected as fast Ca 2+ spikes ( B inset). C-F Effect of I KM inhibitor XE991. C. Cortical SD were more frequently generated in the Scn8a D/+ than WT and XE991 was without effect (genotype: p=0.009, XE991: p>0.57, interaction: p>0.57) D. There was no genotype or XE991 effect in the cortical Ca 2+ spikes (genotype: p>0.41, XE991: p>0.60, interaction: p=0.017). E. The SD frequency in the CA3 was not modified by genotype or XE991 treatment. (genotype: p>0.10, XE991: p>0.99, interaction: p>0.10). F. Spike frequency in the CA3 was low in the control condition, but XE991 greatly enhanced it in Scn8a D/+ slices (genotype: p=0.024, XE991: p=0.0004, interaction: p=0.039). Statistics were calculated by two-way ANOVA with post hoc Sidak test. G&H The effect of I KM activator ICA-110381 (3 µM) was tested in a separate cohort. G. In these experiments, SD was detected only in the Scn8a D/+ cortical tissue and was eliminated by ICA- 110381. (genotype: p=0.026, ICA-110381: p=0.026, interaction: p=0.026) J . Ca 2+ spikes in WT and Scn8a D/+ cortex were also eliminated by ICA-110381. (genotype: p=0.76, ICA-110381: p<0.0001, interaction: p=0.72). Statistics were calculated by two-way ANOVA (genotype and drug effect) followed by post hoc Šídák’s multiple comparisons test.
Thy1 Gcamp6s Gp4.3 Mouse, supplied by Jackson Laboratory, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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vivo Ca 2+ imaging analysis of the effect of I KM modulators on cortical and hippocampal SD and epileptic activities. A&B Representative images and traces of tissue excitability test by ex vivo Ca 2+ imaging. Horizontal slices obtained from WT- or Scn8a D/+ <t>-GCAMP6s</t> slices were incubated in Mg 2+ free ACSF. A. Raw and ratio fluorescence images showing Ca 2+ activities in the cortex and hippocampus CA3. SD was detected as a prolonged Ca 2+ elevation whereas seizure- like activities were detected as fast Ca 2+ spikes ( B inset). C-F Effect of I KM inhibitor XE991. C. Cortical SD were more frequently generated in the Scn8a D/+ than WT and XE991 was without effect (genotype: p=0.009, XE991: p>0.57, interaction: p>0.57) D. There was no genotype or XE991 effect in the cortical Ca 2+ spikes (genotype: p>0.41, XE991: p>0.60, interaction: p=0.017). E. The SD frequency in the CA3 was not modified by genotype or XE991 treatment. (genotype: p>0.10, XE991: p>0.99, interaction: p>0.10). F. Spike frequency in the CA3 was low in the control condition, but XE991 greatly enhanced it in Scn8a D/+ slices (genotype: p=0.024, XE991: p=0.0004, interaction: p=0.039). Statistics were calculated by two-way ANOVA with post hoc Sidak test. G&H The effect of I KM activator ICA-110381 (3 µM) was tested in a separate cohort. G. In these experiments, SD was detected only in the Scn8a D/+ cortical tissue and was eliminated by ICA- 110381. (genotype: p=0.026, ICA-110381: p=0.026, interaction: p=0.026) J . Ca 2+ spikes in WT and Scn8a D/+ cortex were also eliminated by ICA-110381. (genotype: p=0.76, ICA-110381: p<0.0001, interaction: p=0.72). Statistics were calculated by two-way ANOVA (genotype and drug effect) followed by post hoc Šídák’s multiple comparisons test.
Gp4.3 Thy1 Gcamp6s Mice, supplied by Jackson Laboratory, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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vivo Ca 2+ imaging analysis of the effect of I KM modulators on cortical and hippocampal SD and epileptic activities. A&B Representative images and traces of tissue excitability test by ex vivo Ca 2+ imaging. Horizontal slices obtained from WT- or Scn8a D/+ <t>-GCAMP6s</t> slices were incubated in Mg 2+ free ACSF. A. Raw and ratio fluorescence images showing Ca 2+ activities in the cortex and hippocampus CA3. SD was detected as a prolonged Ca 2+ elevation whereas seizure- like activities were detected as fast Ca 2+ spikes ( B inset). C-F Effect of I KM inhibitor XE991. C. Cortical SD were more frequently generated in the Scn8a D/+ than WT and XE991 was without effect (genotype: p=0.009, XE991: p>0.57, interaction: p>0.57) D. There was no genotype or XE991 effect in the cortical Ca 2+ spikes (genotype: p>0.41, XE991: p>0.60, interaction: p=0.017). E. The SD frequency in the CA3 was not modified by genotype or XE991 treatment. (genotype: p>0.10, XE991: p>0.99, interaction: p>0.10). F. Spike frequency in the CA3 was low in the control condition, but XE991 greatly enhanced it in Scn8a D/+ slices (genotype: p=0.024, XE991: p=0.0004, interaction: p=0.039). Statistics were calculated by two-way ANOVA with post hoc Sidak test. G&H The effect of I KM activator ICA-110381 (3 µM) was tested in a separate cohort. G. In these experiments, SD was detected only in the Scn8a D/+ cortical tissue and was eliminated by ICA- 110381. (genotype: p=0.026, ICA-110381: p=0.026, interaction: p=0.026) J . Ca 2+ spikes in WT and Scn8a D/+ cortex were also eliminated by ICA-110381. (genotype: p=0.76, ICA-110381: p<0.0001, interaction: p=0.72). Statistics were calculated by two-way ANOVA (genotype and drug effect) followed by post hoc Šídák’s multiple comparisons test.
Thy1 Gcamp6s Mice Jackson Gp4.3, Strain #024275, supplied by Jackson Laboratory, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/thy1-gcamp6s+gp4%2E3/c57bl+6j+mice/10__7554_slash_elife__90080-247-4-8
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Jackson Laboratory thy1-gcamp6s mice jackson gp4.3 strain #024275
vivo Ca 2+ imaging analysis of the effect of I KM modulators on cortical and hippocampal SD and epileptic activities. A&B Representative images and traces of tissue excitability test by ex vivo Ca 2+ imaging. Horizontal slices obtained from WT- or Scn8a D/+ <t>-GCAMP6s</t> slices were incubated in Mg 2+ free ACSF. A. Raw and ratio fluorescence images showing Ca 2+ activities in the cortex and hippocampus CA3. SD was detected as a prolonged Ca 2+ elevation whereas seizure- like activities were detected as fast Ca 2+ spikes ( B inset). C-F Effect of I KM inhibitor XE991. C. Cortical SD were more frequently generated in the Scn8a D/+ than WT and XE991 was without effect (genotype: p=0.009, XE991: p>0.57, interaction: p>0.57) D. There was no genotype or XE991 effect in the cortical Ca 2+ spikes (genotype: p>0.41, XE991: p>0.60, interaction: p=0.017). E. The SD frequency in the CA3 was not modified by genotype or XE991 treatment. (genotype: p>0.10, XE991: p>0.99, interaction: p>0.10). F. Spike frequency in the CA3 was low in the control condition, but XE991 greatly enhanced it in Scn8a D/+ slices (genotype: p=0.024, XE991: p=0.0004, interaction: p=0.039). Statistics were calculated by two-way ANOVA with post hoc Sidak test. G&H The effect of I KM activator ICA-110381 (3 µM) was tested in a separate cohort. G. In these experiments, SD was detected only in the Scn8a D/+ cortical tissue and was eliminated by ICA- 110381. (genotype: p=0.026, ICA-110381: p=0.026, interaction: p=0.026) J . Ca 2+ spikes in WT and Scn8a D/+ cortex were also eliminated by ICA-110381. (genotype: p=0.76, ICA-110381: p<0.0001, interaction: p=0.72). Statistics were calculated by two-way ANOVA (genotype and drug effect) followed by post hoc Šídák’s multiple comparisons test.
Thy1 Gcamp6s Mice Jackson Gp4.3 Strain #024275, supplied by Jackson Laboratory, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/thy1-gcamp6s+gp4%2E3/c57bl+6j+mice/pmc11060715-176-4-7
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thy1-gcamp6s mice jackson gp4.3 strain #024275 - by Bioz Stars, 2026-10
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Jackson Laboratory thy1-gcamp6s (gp4.3) mice
vivo Ca 2+ imaging analysis of the effect of I KM modulators on cortical and hippocampal SD and epileptic activities. A&B Representative images and traces of tissue excitability test by ex vivo Ca 2+ imaging. Horizontal slices obtained from WT- or Scn8a D/+ <t>-GCAMP6s</t> slices were incubated in Mg 2+ free ACSF. A. Raw and ratio fluorescence images showing Ca 2+ activities in the cortex and hippocampus CA3. SD was detected as a prolonged Ca 2+ elevation whereas seizure- like activities were detected as fast Ca 2+ spikes ( B inset). C-F Effect of I KM inhibitor XE991. C. Cortical SD were more frequently generated in the Scn8a D/+ than WT and XE991 was without effect (genotype: p=0.009, XE991: p>0.57, interaction: p>0.57) D. There was no genotype or XE991 effect in the cortical Ca 2+ spikes (genotype: p>0.41, XE991: p>0.60, interaction: p=0.017). E. The SD frequency in the CA3 was not modified by genotype or XE991 treatment. (genotype: p>0.10, XE991: p>0.99, interaction: p>0.10). F. Spike frequency in the CA3 was low in the control condition, but XE991 greatly enhanced it in Scn8a D/+ slices (genotype: p=0.024, XE991: p=0.0004, interaction: p=0.039). Statistics were calculated by two-way ANOVA with post hoc Sidak test. G&H The effect of I KM activator ICA-110381 (3 µM) was tested in a separate cohort. G. In these experiments, SD was detected only in the Scn8a D/+ cortical tissue and was eliminated by ICA- 110381. (genotype: p=0.026, ICA-110381: p=0.026, interaction: p=0.026) J . Ca 2+ spikes in WT and Scn8a D/+ cortex were also eliminated by ICA-110381. (genotype: p=0.76, ICA-110381: p<0.0001, interaction: p=0.72). Statistics were calculated by two-way ANOVA (genotype and drug effect) followed by post hoc Šídák’s multiple comparisons test.
Thy1 Gcamp6s (Gp4.3) Mice, supplied by Jackson Laboratory, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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a . Top left, representative video frame with automatically labeled tongue markers using DeepLabCut. Top middle, superimposed tongue tip trajectories and x and y velocities of individual lick events during lick left (red) and lick right (blue). Data from an example mouse across sessions within the same task context. Tongue tip trajectory scale bar, 4 pixels (x) and 6 pixels (y). X velocity scale bar, 12 ms and 2 pixels/s. Y velocity scale bar, 12 ms and 1.5 pixels/s. Top right, scatter of averaged pairwise similarity of single lick events (Pearson’s correlation) calculated within session versus across sessions. Data from two mice. Bottom, same as top but for data across task contexts 1 and 2. b . Same as a , but for jaw marker analysis. Jaw tip trajectory scale bar, 4 pixels (x) and 4 pixels (y). X velocity scale bar, 12 ms and 1 pixels/s. Y velocity scale bar, 12 ms and 1.5 pixels/s. c . Left, schematics of learning speed under two models. Context-specific saving effect (top): faster re-learning only for previously learned tasks. Context non-specific saving effect (bottom): faster learning each time. Right, faster reversal learning is consistent with a context-specific saving effect. Re-learning of task context 2’ is significantly faster than initial learning of task context 2 (top). P = 0.0487, paired t-test. Circles indicate individual mice (N = 13 mice). Crosses indicate mean ± s.e.m. We examine task context 2 because the initial learning of task context 1 is confounded by the exposure to home-cage training. To examine context non-specific saving effect, we compare the speed of re-learning task context 1’ versus re-learning task context 2’ (bottom). The two conditions have similar task-specific prior training. No significant difference is observed. P = 0.3425, two-tailed paired t-test. d . Same as Fig. , but separately plotting photoinhibition results for task context 1 (left) and task context 2 (right). e . Experimental timeline of an example mouse imaged within the same task context over extended time. Black, behavior training in automated home-cage. Gray, habituation in two-photon setup. Red, calcium imaging in two-photon setup. All the trials are concatenated. Black triangle indicates the end of learning voluntary head-fixation and start of learning in tactile instructed licking task. Averaging window, 100 trials. f . Same as e , but for two mice imaged across different task contexts. g . Summary plot of experimental timeline from all GP4.3 mice used for imaging in this study. h-i . Behavior performance curves for the initial learning from GP4.3 mice ( h , n = 15 mice, all were trained in automated home-cage) and Slc17a7-Cre x Ai148 mice ( i , n = 11 mice, 7 mice were trained in automated home-cage and 4 mice were manually trained). Different colors represent individual mice. Circles indicate end of the learning curves for GP4.3 mice and termination of training for Slc17a7-Cre x Ai148 mice. j . Behavior performance within imaging sessions across 4 segments of trials. Thin gray lines indicate individual sessions. Thick black lines indicate mean ± s.e.m. Data from Fig. .

Journal: Nature

Article Title: A combinatorial neural code for long-term motor memory

doi: 10.1038/s41586-024-08193-3

Figure Lengend Snippet: a . Top left, representative video frame with automatically labeled tongue markers using DeepLabCut. Top middle, superimposed tongue tip trajectories and x and y velocities of individual lick events during lick left (red) and lick right (blue). Data from an example mouse across sessions within the same task context. Tongue tip trajectory scale bar, 4 pixels (x) and 6 pixels (y). X velocity scale bar, 12 ms and 2 pixels/s. Y velocity scale bar, 12 ms and 1.5 pixels/s. Top right, scatter of averaged pairwise similarity of single lick events (Pearson’s correlation) calculated within session versus across sessions. Data from two mice. Bottom, same as top but for data across task contexts 1 and 2. b . Same as a , but for jaw marker analysis. Jaw tip trajectory scale bar, 4 pixels (x) and 4 pixels (y). X velocity scale bar, 12 ms and 1 pixels/s. Y velocity scale bar, 12 ms and 1.5 pixels/s. c . Left, schematics of learning speed under two models. Context-specific saving effect (top): faster re-learning only for previously learned tasks. Context non-specific saving effect (bottom): faster learning each time. Right, faster reversal learning is consistent with a context-specific saving effect. Re-learning of task context 2’ is significantly faster than initial learning of task context 2 (top). P = 0.0487, paired t-test. Circles indicate individual mice (N = 13 mice). Crosses indicate mean ± s.e.m. We examine task context 2 because the initial learning of task context 1 is confounded by the exposure to home-cage training. To examine context non-specific saving effect, we compare the speed of re-learning task context 1’ versus re-learning task context 2’ (bottom). The two conditions have similar task-specific prior training. No significant difference is observed. P = 0.3425, two-tailed paired t-test. d . Same as Fig. , but separately plotting photoinhibition results for task context 1 (left) and task context 2 (right). e . Experimental timeline of an example mouse imaged within the same task context over extended time. Black, behavior training in automated home-cage. Gray, habituation in two-photon setup. Red, calcium imaging in two-photon setup. All the trials are concatenated. Black triangle indicates the end of learning voluntary head-fixation and start of learning in tactile instructed licking task. Averaging window, 100 trials. f . Same as e , but for two mice imaged across different task contexts. g . Summary plot of experimental timeline from all GP4.3 mice used for imaging in this study. h-i . Behavior performance curves for the initial learning from GP4.3 mice ( h , n = 15 mice, all were trained in automated home-cage) and Slc17a7-Cre x Ai148 mice ( i , n = 11 mice, 7 mice were trained in automated home-cage and 4 mice were manually trained). Different colors represent individual mice. Circles indicate end of the learning curves for GP4.3 mice and termination of training for Slc17a7-Cre x Ai148 mice. j . Behavior performance within imaging sessions across 4 segments of trials. Thin gray lines indicate individual sessions. Thick black lines indicate mean ± s.e.m. Data from Fig. .

Article Snippet: Fifteen GP4.3 mice (Thy1-GCaMP6s; Jackson laboratory, JAX 024275) were used for longitudinal two-photon calcium imaging.

Techniques: Labeling, Marker, Two Tailed Test, Imaging

vivo Ca 2+ imaging analysis of the effect of I KM modulators on cortical and hippocampal SD and epileptic activities. A&B Representative images and traces of tissue excitability test by ex vivo Ca 2+ imaging. Horizontal slices obtained from WT- or Scn8a D/+ -GCAMP6s slices were incubated in Mg 2+ free ACSF. A. Raw and ratio fluorescence images showing Ca 2+ activities in the cortex and hippocampus CA3. SD was detected as a prolonged Ca 2+ elevation whereas seizure- like activities were detected as fast Ca 2+ spikes ( B inset). C-F Effect of I KM inhibitor XE991. C. Cortical SD were more frequently generated in the Scn8a D/+ than WT and XE991 was without effect (genotype: p=0.009, XE991: p>0.57, interaction: p>0.57) D. There was no genotype or XE991 effect in the cortical Ca 2+ spikes (genotype: p>0.41, XE991: p>0.60, interaction: p=0.017). E. The SD frequency in the CA3 was not modified by genotype or XE991 treatment. (genotype: p>0.10, XE991: p>0.99, interaction: p>0.10). F. Spike frequency in the CA3 was low in the control condition, but XE991 greatly enhanced it in Scn8a D/+ slices (genotype: p=0.024, XE991: p=0.0004, interaction: p=0.039). Statistics were calculated by two-way ANOVA with post hoc Sidak test. G&H The effect of I KM activator ICA-110381 (3 µM) was tested in a separate cohort. G. In these experiments, SD was detected only in the Scn8a D/+ cortical tissue and was eliminated by ICA- 110381. (genotype: p=0.026, ICA-110381: p=0.026, interaction: p=0.026) J . Ca 2+ spikes in WT and Scn8a D/+ cortex were also eliminated by ICA-110381. (genotype: p=0.76, ICA-110381: p<0.0001, interaction: p=0.72). Statistics were calculated by two-way ANOVA (genotype and drug effect) followed by post hoc Šídák’s multiple comparisons test.

Journal: bioRxiv

Article Title: Persistent Na + current couples spreading depolarization to seizures in Scn8a gain of function mice

doi: 10.1101/2024.10.11.617888

Figure Lengend Snippet: vivo Ca 2+ imaging analysis of the effect of I KM modulators on cortical and hippocampal SD and epileptic activities. A&B Representative images and traces of tissue excitability test by ex vivo Ca 2+ imaging. Horizontal slices obtained from WT- or Scn8a D/+ -GCAMP6s slices were incubated in Mg 2+ free ACSF. A. Raw and ratio fluorescence images showing Ca 2+ activities in the cortex and hippocampus CA3. SD was detected as a prolonged Ca 2+ elevation whereas seizure- like activities were detected as fast Ca 2+ spikes ( B inset). C-F Effect of I KM inhibitor XE991. C. Cortical SD were more frequently generated in the Scn8a D/+ than WT and XE991 was without effect (genotype: p=0.009, XE991: p>0.57, interaction: p>0.57) D. There was no genotype or XE991 effect in the cortical Ca 2+ spikes (genotype: p>0.41, XE991: p>0.60, interaction: p=0.017). E. The SD frequency in the CA3 was not modified by genotype or XE991 treatment. (genotype: p>0.10, XE991: p>0.99, interaction: p>0.10). F. Spike frequency in the CA3 was low in the control condition, but XE991 greatly enhanced it in Scn8a D/+ slices (genotype: p=0.024, XE991: p=0.0004, interaction: p=0.039). Statistics were calculated by two-way ANOVA with post hoc Sidak test. G&H The effect of I KM activator ICA-110381 (3 µM) was tested in a separate cohort. G. In these experiments, SD was detected only in the Scn8a D/+ cortical tissue and was eliminated by ICA- 110381. (genotype: p=0.026, ICA-110381: p=0.026, interaction: p=0.026) J . Ca 2+ spikes in WT and Scn8a D/+ cortex were also eliminated by ICA-110381. (genotype: p=0.76, ICA-110381: p<0.0001, interaction: p=0.72). Statistics were calculated by two-way ANOVA (genotype and drug effect) followed by post hoc Šídák’s multiple comparisons test.

Article Snippet: In some experiments, Scn8a D/+ mice were crossed with a Thy1-GCAMP6s GP4.3 mouse (JAX# 024275) for Ca 2+ imaging studies.

Techniques: Imaging, Ex Vivo, Incubation, Fluorescence, Generated, Modification, Control